Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX189368: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-92858' containing sample 'Cryptococcus neoformans var. grubii AD2-60a' from individual 'Cryptococcus neoformans AD2_60a'
2 ILLUMINA (Illumina HiSeq 2000) runs: 20.3M spots, 4.1G bases, 2.2Gb downloads

UUID: ec827b1f-5871-4f28-bff9-9c221ac09c91

Design: 3-5kb robo-jumps

Submitted by: Broad Institute (BI)

Study: Cryptococcus neoformans Genome sequencing

PRJNA174542 • SRP019889 • All experiments • All runs

Sample: Generic sample from Cryptococcus neoformans var. grubii AD2-60a

SAMN01162748 • SRS409058 • All experiments • All runs

Organism: Cryptococcus neoformans var. grubii AD2-60a

Library:

Name: Solexa-92858

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 9 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 186332.0

library_type: IlluminaStufferlessJump

lsid: broadinstitute.org:bsp.prod.sample:2SKA5

material_type: DNA:DNA Somatic

project: G18556

root_sample_id: SM-2H1EB

sample_id: SM-2SKA5

work_request: 29787

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2012-06-03 10:58:07.0	GAPipeline	RTA1.13.48	Sequencer Application 1.5.15.1

Runs: 2 runs, 20.3M spots, 4.1G bases, 2.2Gb

Run	# of Spots	# of Bases	Size	Published
SRR576302	10,168,940	2.1G	1.1Gb	2012-09-25
SRR576315	10,108,695	2G	1.1Gb	2012-09-25

ID:: 248113

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